Using FSL

FSL is a comprehensive library of analysis tools for FMRI, MRI and DTI brain imaging data. It is developed by the Analysis Group at FMRIB of the University of Oxford.

This KB Article References: High Performance Computing

This Information is Intended for: Guests, Instructors, Researchers, Staff

Created: 08/04/2017 Last Updated: 05/15/2024

FSL 5.0.10 is available on SeaWulf as a module. This can be accessed by:

module load fsl/5.0.10

For FDT submission scripts you must set the FSLMACHINELIS environment variable with the following command:

export FSLMACHINELIS=awk 'NR%2{{printf "%s ",$0;next;}}1' $SLURM_NODELIST

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